virSEAK JSI's SARS-CoV-2 tool
Virus Features
ORF
Gene
5'/3' UTR
mat. peptide
stem loop
Variant Statistics over all isolates
AA change
no AA change
relevant for type
%

Analyze NGS Data
Type :
Ref :
My Seq :
Matches : Evolution :
Mismatches : Frequency :
Missing :
Identical Isolates :
Findings :
Countries :
 
 
 

Variants in analyzed sequence:

Position Nuc change AA change Gene Affected mat. peptides Protein ID Count Frequency %
Sequence length :
Variants :
A :
T :
Others :
G :
C :
Position Nuc change AA change Gene Affected mat. peptides Protein ID Count Frequency %

Tracks

    Country # of Isolates # of Types
    Country # of Isolates # of Types
    Type Country # of Findings % of Findings